species:   Clros
pid:       PID2225
parent:    cro-mir-19
paralog:   
locus:     CADEHS020000003.2:2070875-2070937
matures:   ['UGAGAAGCUGGAUAGAUUC', '']
srr:       ERR5960111
genome:    /Users/jax/+Genomes/Fungal_genomes/Clros.GCA_902827195.2_C_rosea_IK726_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Piombo2021-ru.ERR5960111.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Piombo2021-ru.ERR5960111.cram CADEHS020000003.2:2070875-2070937

19 out of bounds
13 alignments
5 proper strand
5 stranded perfect matches

***************                           *********************
AUCAAUCUUGUUCAGGGCCACAAUGAAUGGCGUCUUGCGGUCCUUGAGAAGCUGGAUAGAUUC
(((...(((.((.((((((.(((.((......))))).)))))).)).)))...)))......
--------------------------------------------UGAGAAGCUGGAUAGAUUC l=19 a=5 c
--------------------------------------------------------------- l=0 a=0 c*
--------------------------------------------UGAGAAGCUGGAUAGAUUC l=19 a=5 ma
--------------------------------------------------------------- l=0 a=0 ma*

--------------------------------------------UGAGAAGCUGGAUAGAUUC l=19 a=5 (c,ma)

mb-00010
ax-0001000
ku-01
ss-101010001000
fn-101
